Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00299Q6ZSB3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 SLC22A20-204ENST00000530038 1673 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AC003669.1-201ENST00000334569 611 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CRYGFP-201ENST00000418459 633 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ZNRF2P3-201ENST00000424200 374 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CROCCP5-201ENST00000436658 830 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AL157888.1-201ENST00000631930 593 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 AC015656.1-201ENST00000624209 3578 ntBASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00299Q6ZSB3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00299Q6ZSB3 ACTG1P4-201ENST00000425123 1122 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms