Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRIG3Q6UXM1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.84■□□□□ 0.29
LRIG3Q6UXM1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIG3Q6UXM1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.84■□□□□ 0.29
LRIG3Q6UXM1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRIG3Q6UXM1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRIG3Q6UXM1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 SPDYE21P-201ENST00000413323 827 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 AK4P3-201ENST00000418260 669 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 AC112907.2-201ENST00000448639 330 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 KRT18P38-201ENST00000449496 1282 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 AL590787.1-201ENST00000568856 1315 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.83■□□□□ 0.28
LRIG3Q6UXM1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AL592424.1-201ENST00000563624 1536 ntBASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AC092647.4-201ENST00000457211 535 ntBASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AC090616.6-201ENST00000582640 721 ntBASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 LINC01101-201ENST00000622953 1884 ntBASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRIG3Q6UXM1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRIG3Q6UXM1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms