Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 AC068472.1-201ENST00000474589 881 ntBASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 AC106881.1-201ENST00000605849 3329 ntBASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.27■□□□□ 0.35
FOXR1Q6PIV2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 CICP24-201ENST00000605464 2705 ntBASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FOXR1Q6PIV2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 CICP14-201ENST00000629111 2732 ntBASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
FOXR1Q6PIV2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms