Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.47■□□□□ 0.87
RC3H1Q5TC82 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AL691432.1-201ENST00000596308 1422 ntBASIC20.46■□□□□ 0.87
RC3H1Q5TC82 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AC005229.1-201ENST00000392885 409 ntBASIC20.46■□□□□ 0.87
RC3H1Q5TC82 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 TDH-203ENST00000531764 1110 ntBASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.46■□□□□ 0.87
RC3H1Q5TC82 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
RC3H1Q5TC82 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 RPL7P3-201ENST00000441388 714 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 AP000812.2-201ENST00000538934 718 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 AL359711.2-201ENST00000563105 872 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 RN7SL219P-201ENST00000582872 296 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 AC020907.1-201ENST00000616460 1350 ntBASIC20.45■□□□□ 0.86
RC3H1Q5TC82 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RC3H1Q5TC82 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 FAM86LP-201ENST00000478302 853 ntBASIC20.44■□□□□ 0.86
RC3H1Q5TC82 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
RC3H1Q5TC82 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 AC092933.1-201ENST00000393644 945 ntBASIC20.43■□□□□ 0.86
RC3H1Q5TC82 AZGP1P1-201ENST00000411909 902 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms