Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P5Q59GN2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 AC006449.6-201ENST00000612330 2296 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 FAM185BP-201ENST00000443595 716 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CXCL1P1-201ENST00000502804 216 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 KRT126P-201ENST00000549467 1181 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 AL160237.2-201ENST00000556165 472 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 REXO1L8P-201ENST00000604378 1897 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 AC046158.3-201ENST00000624947 2558 ntBASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P5Q59GN2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 LINC01144-201ENST00000626198 1710 ntBASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 AC116407.3-201ENST00000623905 1129 ntBASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms