Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 KRT16P4-201ENST00000453883 522 ntBASIC14.67□□□□□ -0.06
ODF4Q2M2E3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AL022326.1-202ENST00000641533 845 ntBASIC14.67□□□□□ -0.06
ODF4Q2M2E3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 MST1L-201ENST00000442552 2185 ntBASIC14.67□□□□□ -0.06
ODF4Q2M2E3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ODF4Q2M2E3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 GGT3P-204ENST00000453783 1664 ntBASIC14.66□□□□□ -0.06
ODF4Q2M2E3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.66□□□□□ -0.06
ODF4Q2M2E3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.66□□□□□ -0.06
ODF4Q2M2E3 AC013467.2-201ENST00000605472 835 ntBASIC14.66□□□□□ -0.06
ODF4Q2M2E3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ODF4Q2M2E3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms