Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 YBX1P5-201ENST00000509441 847 ntBASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 AC055717.3-201ENST00000622967 595 ntBASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 AC134684.3-201ENST00000641758 218 ntBASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CCDC15Q0P6D6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 AP006288.1-201ENST00000446065 395 ntBASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 AC005412.3-201ENST00000580309 715 ntBASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC15Q0P6D6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 AC254562.1-201ENST00000417586 456 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 RPS8P6-201ENST00000426177 609 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 AC112191.1-201ENST00000523689 701 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 SNHG9-202ENST00000564014 471 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 AP001160.2-201ENST00000596071 487 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 AC068137.2-201ENST00000605408 478 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC15Q0P6D6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms