Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.59□□□□□ -0.07
NKX6-1P78426 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX6-1P78426 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX6-1P78426 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX6-1P78426 Z92544.3-201ENST00000624747 417 ntBASIC14.59□□□□□ -0.07
NKX6-1P78426 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
NKX6-1P78426 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX6-1P78426 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX6-1P78426 TOP3BP1-201ENST00000420768 1380 ntBASIC14.59□□□□□ -0.07
NKX6-1P78426 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX6-1P78426 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
NKX6-1P78426 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
NKX6-1P78426 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
NKX6-1P78426 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
NKX6-1P78426 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NKX6-1P78426 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX6-1P78426 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX6-1P78426 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NKX6-1P78426 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX6-1P78426 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX6-1P78426 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 AC015922.1-201ENST00000421102 1152 ntBASIC14.58□□□□□ -0.08
NKX6-1P78426 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX6-1P78426 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 DUX4L27-201ENST00000554796 1261 ntBASIC14.58□□□□□ -0.08
NKX6-1P78426 AC005412.3-201ENST00000580309 715 ntBASIC14.58□□□□□ -0.08
NKX6-1P78426 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.58□□□□□ -0.08
NKX6-1P78426 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NKX6-1P78426 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-1P78426 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NKX6-1P78426 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-1P78426 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 AC092053.1-201ENST00000605787 1936 ntBASIC14.57□□□□□ -0.08
NKX6-1P78426 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-1P78426 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 AC005237.2-201ENST00000434368 219 ntBASIC14.57□□□□□ -0.08
NKX6-1P78426 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-1P78426 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-1P78426 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.57□□□□□ -0.08
NKX6-1P78426 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX6-1P78426 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX6-1P78426 AC015911.4-201ENST00000588022 1070 ntBASIC14.57□□□□□ -0.08
NKX6-1P78426 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms