Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 AC015922.1-201ENST00000421102 1152 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 FAM207CP-201ENST00000443486 507 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 HLA-V-204ENST00000476601 1289 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN2P57739 SERBP1P5-201ENST00000510079 1181 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN2P57739 AL589739.1-201ENST00000607720 493 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 AC020765.3-201ENST00000613051 740 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLDN2P57739 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 AL035456.1-201ENST00000456064 1369 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 OR6D1P-203ENST00000641209 4860 ntBASIC16.22■□□□□ 0.19
CLDN2P57739 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 AC006538.1-201ENST00000567905 1585 ntBASIC16.22■□□□□ 0.19
CLDN2P57739 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 RPL37AP1-201ENST00000412502 279 ntBASIC16.22■□□□□ 0.19
CLDN2P57739 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN2P57739 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN2P57739 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 AC190387.1-201ENST00000551683 408 ntBASIC16.22■□□□□ 0.19
CLDN2P57739 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN2P57739 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLDN2P57739 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 UBALD1-205ENST00000590891 2641 ntBASIC16.22■□□□□ 0.19
CLDN2P57739 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN2P57739 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLDN2P57739 CETN4P-206ENST00000642099 2168 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN2P57739 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN2P57739 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN2P57739 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN2P57739 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.21■□□□□ 0.19
CLDN2P57739 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLDN2P57739 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLDN2P57739 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN2P57739 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN2P57739 TEX28P1-201ENST00000613479 1221 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms