Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
CLDN12P56749 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN12P56749 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 MINOS1P3-201ENST00000457048 203 ntBASIC14.4□□□□□ -0.1
CLDN12P56749 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.4□□□□□ -0.1
CLDN12P56749 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.4□□□□□ -0.1
CLDN12P56749 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN12P56749 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 PPT1-215ENST00000641471 2368 ntBASIC14.4□□□□□ -0.1
CLDN12P56749 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CLDN12P56749 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN12P56749 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN12P56749 AL590787.1-201ENST00000568856 1315 ntBASIC14.4□□□□□ -0.1
CLDN12P56749 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN12P56749 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDN12P56749 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN12P56749 AC022616.7-201ENST00000525383 220 ntBASIC14.39□□□□□ -0.11
CLDN12P56749 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN12P56749 BNIP3P18-201ENST00000593976 575 ntBASIC14.39□□□□□ -0.11
CLDN12P56749 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLDN12P56749 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDN12P56749 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN12P56749 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLDN12P56749 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN12P56749 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN12P56749 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CLDN12P56749 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 AC022532.1-201ENST00000624563 1728 ntBASIC14.38□□□□□ -0.11
CLDN12P56749 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 AC233702.3-201ENST00000578656 1387 ntBASIC14.38□□□□□ -0.11
CLDN12P56749 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms