Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SUMO3P55854 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.9□□□□□ -0.02
SUMO3P55854 KRT18P13-201ENST00000400056 1290 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.9□□□□□ -0.02
SUMO3P55854 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
SUMO3P55854 SPCS2P4-201ENST00000436160 681 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SUMO3P55854 AC245100.5-201ENST00000452108 331 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.9□□□□□ -0.02
SUMO3P55854 AC112482.1-201ENST00000492080 688 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SUMO3P55854 AP000344.2-201ENST00000512987 629 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.9□□□□□ -0.02
SUMO3P55854 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 AL513210.1-201ENST00000629608 234 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 AC105339.1-204ENST00000636249 355 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SUMO3P55854 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 AL589702.1-201ENST00000641229 1509 ntBASIC14.9□□□□□ -0.02
SUMO3P55854 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.9□□□□□ -0.02
SUMO3P55854 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SUMO3P55854 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SUMO3P55854 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 AC142381.1-201ENST00000426099 345 ntBASIC14.89□□□□□ -0.03
SUMO3P55854 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
SUMO3P55854 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SUMO3P55854 AC084121.4-201ENST00000641598 221 ntBASIC14.89□□□□□ -0.03
SUMO3P55854 AF228730.8-201ENST00000642140 221 ntBASIC14.89□□□□□ -0.03
SUMO3P55854 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
SUMO3P55854 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SUMO3P55854 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.89□□□□□ -0.03
SUMO3P55854 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.88□□□□□ -0.03
SUMO3P55854 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.88□□□□□ -0.03
SUMO3P55854 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 MIR346-201ENST00000362234 95 ntBASIC14.88□□□□□ -0.03
SUMO3P55854 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.88□□□□□ -0.03
SUMO3P55854 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SUMO3P55854 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms