Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.65■□□□□ 0.1
LIM2P55344 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.65■□□□□ 0.1
LIM2P55344 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.65■□□□□ 0.1
LIM2P55344 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.65■□□□□ 0.1
LIM2P55344 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.65■□□□□ 0.1
LIM2P55344 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.65■□□□□ 0.1
LIM2P55344 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.65■□□□□ 0.1
LIM2P55344 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 WASH6P-202ENST00000359512 1437 ntBASIC15.65■□□□□ 0.1
LIM2P55344 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIM2P55344 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIM2P55344 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.65■□□□□ 0.1
LIM2P55344 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LIM2P55344 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIM2P55344 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIM2P55344 AC005052.1-201ENST00000625181 2492 ntBASIC15.65■□□□□ 0.1
LIM2P55344 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LIM2P55344 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 ME2P1-201ENST00000426028 1970 ntBASIC15.64■□□□□ 0.09
LIM2P55344 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 GPX1P2-201ENST00000429271 606 ntBASIC15.64■□□□□ 0.09
LIM2P55344 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.64■□□□□ 0.09
LIM2P55344 KRT18P34-201ENST00000488218 1270 ntBASIC15.64■□□□□ 0.09
LIM2P55344 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 AC092865.5-201ENST00000545435 363 ntBASIC15.64■□□□□ 0.09
LIM2P55344 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 RARRES2P8-201ENST00000566335 367 ntBASIC15.64■□□□□ 0.09
LIM2P55344 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.64■□□□□ 0.09
LIM2P55344 AC010327.4-202ENST00000591484 748 ntBASIC15.64■□□□□ 0.09
LIM2P55344 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
LIM2P55344 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
LIM2P55344 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 LINC01144-201ENST00000626198 1710 ntBASIC15.64■□□□□ 0.09
LIM2P55344 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIM2P55344 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIM2P55344 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LIM2P55344 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.63■□□□□ 0.09
LIM2P55344 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.63■□□□□ 0.09
LIM2P55344 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.63■□□□□ 0.09
LIM2P55344 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIM2P55344 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LIM2P55344 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.63■□□□□ 0.09
LIM2P55344 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.63■□□□□ 0.09
LIM2P55344 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIM2P55344 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.63■□□□□ 0.09
LIM2P55344 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LIM2P55344 AL355306.1-201ENST00000415580 579 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms