Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
CDH11P55287 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH11P55287 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDH11P55287 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH11P55287 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH11P55287 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 LAGE3P1-201ENST00000425356 484 ntBASIC15.18■□□□□ 0.02
CDH11P55287 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CDH11P55287 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH11P55287 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDH11P55287 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 AL671883.3-201ENST00000603274 991 ntBASIC15.18■□□□□ 0.02
CDH11P55287 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 AC008735.5-201ENST00000623544 497 ntBASIC15.18■□□□□ 0.02
CDH11P55287 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH11P55287 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 AL022326.1-202ENST00000641533 845 ntBASIC15.18■□□□□ 0.02
CDH11P55287 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 PMPCAP1-201ENST00000508114 1576 ntBASIC15.18■□□□□ 0.02
CDH11P55287 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH11P55287 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH11P55287 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH11P55287 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH11P55287 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.17■□□□□ 0.02
CDH11P55287 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CDH11P55287 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 MIR574-201ENST00000385209 96 ntBASIC15.17■□□□□ 0.02
CDH11P55287 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDH11P55287 MIR940-201ENST00000401276 94 ntBASIC15.17■□□□□ 0.02
CDH11P55287 AC098831.1-202ENST00000438821 336 ntBASIC15.17■□□□□ 0.02
CDH11P55287 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 AC106730.1-201ENST00000566722 1090 ntBASIC15.17■□□□□ 0.02
CDH11P55287 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 AC107918.4-202ENST00000641623 219 ntBASIC15.17■□□□□ 0.02
CDH11P55287 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH11P55287 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 AC148477.5-201ENST00000625164 1645 ntBASIC15.17■□□□□ 0.02
CDH11P55287 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH11P55287 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH11P55287 KRT8P49-201ENST00000604166 1432 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms