Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKN2DP55273 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKN2DP55273 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKN2DP55273 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKN2DP55273 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.29■□□□□ 0.2
CDKN2DP55273 AL009183.1-201ENST00000603760 355 ntBASIC16.29■□□□□ 0.2
CDKN2DP55273 AC023141.13-201ENST00000604991 943 ntBASIC16.29■□□□□ 0.2
CDKN2DP55273 AC064836.3-201ENST00000607928 673 ntBASIC16.29■□□□□ 0.2
CDKN2DP55273 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKN2DP55273 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKN2DP55273 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKN2DP55273 AL592424.1-201ENST00000563624 1536 ntBASIC16.29■□□□□ 0.2
CDKN2DP55273 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDKN2DP55273 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKN2DP55273 AC025580.3-201ENST00000617932 1424 ntBASIC16.28■□□□□ 0.2
CDKN2DP55273 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 IL9RP2-201ENST00000423948 1312 ntBASIC16.28■□□□□ 0.2
CDKN2DP55273 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKN2DP55273 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 FDX1P1-201ENST00000449115 551 ntBASIC16.28■□□□□ 0.2
CDKN2DP55273 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKN2DP55273 RPL13AP23-201ENST00000480739 586 ntBASIC16.28■□□□□ 0.2
CDKN2DP55273 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKN2DP55273 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKN2DP55273 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKN2DP55273 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKN2DP55273 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKN2DP55273 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 AC004877.2-201ENST00000623941 599 ntBASIC16.28■□□□□ 0.2
CDKN2DP55273 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKN2DP55273 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKN2DP55273 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKN2DP55273 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKN2DP55273 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKN2DP55273 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDKN2DP55273 BCAR1-209ENST00000546196 1340 ntBASIC16.27■□□□□ 0.2
CDKN2DP55273 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDKN2DP55273 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.27■□□□□ 0.2
CDKN2DP55273 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 AC109635.5-201ENST00000533593 962 ntBASIC16.27■□□□□ 0.2
CDKN2DP55273 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKN2DP55273 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms