Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 TSSK5P-201ENST00000423978 907 ntBASIC16■□□□□ 0.15
PDX1P52945 CRB3P1-201ENST00000449338 276 ntBASIC16■□□□□ 0.15
PDX1P52945 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16■□□□□ 0.15
PDX1P52945 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16■□□□□ 0.15
PDX1P52945 AP005018.1-201ENST00000525475 301 ntBASIC16■□□□□ 0.15
PDX1P52945 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16■□□□□ 0.15
PDX1P52945 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16■□□□□ 0.15
PDX1P52945 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16■□□□□ 0.15
PDX1P52945 CYP2A7P1-201ENST00000595391 815 ntBASIC16■□□□□ 0.15
PDX1P52945 SPDYE12P-201ENST00000618416 771 ntBASIC16■□□□□ 0.15
PDX1P52945 AP001350.2-201ENST00000625104 1094 ntBASIC16■□□□□ 0.15
PDX1P52945 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16■□□□□ 0.15
PDX1P52945 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDX1P52945 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 AC105020.1-201ENST00000435356 2205 ntBASIC16■□□□□ 0.15
PDX1P52945 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDX1P52945 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.99■□□□□ 0.15
PDX1P52945 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
PDX1P52945 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 AC241585.1-201ENST00000433527 519 ntBASIC15.99■□□□□ 0.15
PDX1P52945 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 GAPDHP21-201ENST00000450301 1010 ntBASIC15.99■□□□□ 0.15
PDX1P52945 AL512638.1-201ENST00000457493 794 ntBASIC15.99■□□□□ 0.15
PDX1P52945 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.99■□□□□ 0.15
PDX1P52945 RARRES2P9-201ENST00000565168 469 ntBASIC15.99■□□□□ 0.15
PDX1P52945 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 KRT8P49-201ENST00000604166 1432 ntBASIC15.99■□□□□ 0.15
PDX1P52945 AC100757.3-201ENST00000622361 1406 ntBASIC15.99■□□□□ 0.15
PDX1P52945 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PDX1P52945 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.99■□□□□ 0.15
PDX1P52945 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.99■□□□□ 0.15
PDX1P52945 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDX1P52945 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDX1P52945 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PDX1P52945 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDX1P52945 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 PKD1P5-201ENST00000532415 10291 ntBASIC15.98■□□□□ 0.15
PDX1P52945 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PDX1P52945 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms