Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KRT6CP48668 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6CP48668 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 AP002414.3-201ENST00000589352 1468 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6CP48668 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6CP48668 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 HNRNPDP1-201ENST00000439535 754 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6CP48668 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6CP48668 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6CP48668 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6CP48668 AC068587.6-202ENST00000641839 5619 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6CP48668 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6CP48668 AC012569.1-201ENST00000591191 1524 ntBASIC16.04■□□□□ 0.16
KRT6CP48668 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 AC022188.1-201ENST00000620960 1664 ntBASIC16.03■□□□□ 0.16
KRT6CP48668 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
KRT6CP48668 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.03■□□□□ 0.16
KRT6CP48668 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.03■□□□□ 0.16
KRT6CP48668 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.03■□□□□ 0.16
KRT6CP48668 LINC02199-201ENST00000506655 2702 ntBASIC16.03■□□□□ 0.16
KRT6CP48668 AL596087.1-201ENST00000400979 1969 ntBASIC16.03■□□□□ 0.16
KRT6CP48668 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 AC008741.2-201ENST00000612792 3115 ntBASIC16.03■□□□□ 0.16
KRT6CP48668 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
KRT6CP48668 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.03■□□□□ 0.16
KRT6CP48668 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
KRT6CP48668 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6CP48668 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6CP48668 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6CP48668 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KRT6CP48668 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
KRT6CP48668 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
KRT6CP48668 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT6CP48668 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms