Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 AC131009.4-201ENST00000624048 1740 ntBASIC15.29■□□□□ 0.04
HTR3AP46098 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 RNA5SP419-201ENST00000515908 135 ntBASIC15.29■□□□□ 0.04
HTR3AP46098 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 AC107918.2-201ENST00000530817 355 ntBASIC15.29■□□□□ 0.04
HTR3AP46098 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 AC004790.2-201ENST00000623588 572 ntBASIC15.29■□□□□ 0.04
HTR3AP46098 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HTR3AP46098 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 FER1L4-210ENST00000615531 5998 ntBASIC15.29■□□□□ 0.04
HTR3AP46098 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HTR3AP46098 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR3AP46098 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR3AP46098 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HTR3AP46098 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 HLA-A-201ENST00000376802 1334 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR3AP46098 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR3AP46098 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR3AP46098 AC009078.2-202ENST00000463353 338 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HTR3AP46098 AC087641.1-201ENST00000557561 1021 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR3AP46098 MIR4492-201ENST00000581627 80 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HTR3AP46098 AL049840.3-201ENST00000602669 611 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
HTR3AP46098 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR3AP46098 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 AC006538.1-201ENST00000567905 1585 ntBASIC15.28■□□□□ 0.04
HTR3AP46098 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR3AP46098 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR3AP46098 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms