Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A3P43003 ME2P1-201ENST00000426028 1970 ntBASIC15.22■□□□□ 0.03
SLC1A3P43003 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A3P43003 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A3P43003 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SLC1A3P43003 NFIC-211ENST00000641145 8399 ntBASIC15.21■□□□□ 0.03
SLC1A3P43003 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A3P43003 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A3P43003 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC1A3P43003 MIR4515-201ENST00000584082 81 ntBASIC15.21■□□□□ 0.03
SLC1A3P43003 Z83851.2-201ENST00000609564 659 ntBASIC15.21■□□□□ 0.03
SLC1A3P43003 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC1A3P43003 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC1A3P43003 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC1A3P43003 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC1A3P43003 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC1A3P43003 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC1A3P43003 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 FDX1P1-201ENST00000449115 551 ntBASIC15.2■□□□□ 0.02
SLC1A3P43003 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC1A3P43003 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC1A3P43003 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC1A3P43003 AL031731.1-201ENST00000642131 2094 ntBASIC15.2■□□□□ 0.02
SLC1A3P43003 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC1A3P43003 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC1A3P43003 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms