Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL591424.1-201ENST00000442569 1213 ntBASIC16.72■□□□□ 0.27
HADHAP40939 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.72■□□□□ 0.27
HADHAP40939 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.72■□□□□ 0.27
HADHAP40939 AC106730.1-201ENST00000566722 1090 ntBASIC16.72■□□□□ 0.27
HADHAP40939 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 AC064836.3-201ENST00000607928 673 ntBASIC16.72■□□□□ 0.27
HADHAP40939 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.72■□□□□ 0.27
HADHAP40939 AC010507.1-201ENST00000633895 436 ntBASIC16.72■□□□□ 0.27
HADHAP40939 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.72■□□□□ 0.27
HADHAP40939 PCDHA1-201ENST00000378133 2726 ntBASIC16.72■□□□□ 0.27
HADHAP40939 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.72■□□□□ 0.27
HADHAP40939 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.72■□□□□ 0.27
HADHAP40939 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.72■□□□□ 0.27
HADHAP40939 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HADHAP40939 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HADHAP40939 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.71■□□□□ 0.27
HADHAP40939 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
HADHAP40939 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HADHAP40939 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HADHAP40939 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.71■□□□□ 0.27
HADHAP40939 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.71■□□□□ 0.27
HADHAP40939 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
HADHAP40939 AC023141.13-201ENST00000604991 943 ntBASIC16.71■□□□□ 0.27
HADHAP40939 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.71■□□□□ 0.27
HADHAP40939 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HADHAP40939 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HADHAP40939 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HADHAP40939 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HADHAP40939 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HADHAP40939 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
HADHAP40939 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.71■□□□□ 0.26
HADHAP40939 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
HADHAP40939 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.7■□□□□ 0.26
HADHAP40939 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 AL671710.1-201ENST00000610245 2349 ntBASIC16.7■□□□□ 0.26
HADHAP40939 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HADHAP40939 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.7■□□□□ 0.26
HADHAP40939 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HADHAP40939 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms