Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCLP35914 AP006288.1-201ENST00000446065 395 ntBASIC16.39■□□□□ 0.21
HMGCLP35914 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
HMGCLP35914 IGHV3-62-201ENST00000520057 340 ntBASIC16.39■□□□□ 0.21
HMGCLP35914 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGCLP35914 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGCLP35914 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGCLP35914 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGCLP35914 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGCLP35914 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCLP35914 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCLP35914 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HMGCLP35914 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGCLP35914 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HMGCLP35914 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGCLP35914 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 AC006449.6-201ENST00000612330 2296 ntBASIC16.38■□□□□ 0.21
HMGCLP35914 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 CYP2T1P-202ENST00000641596 2535 ntBASIC16.38■□□□□ 0.21
HMGCLP35914 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HMGCLP35914 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HMGCLP35914 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 AL592309.1-201ENST00000443127 649 ntBASIC16.38■□□□□ 0.21
HMGCLP35914 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.38■□□□□ 0.21
HMGCLP35914 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
HMGCLP35914 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 AL589702.1-201ENST00000641229 1509 ntBASIC16.38■□□□□ 0.21
HMGCLP35914 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HMGCLP35914 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HMGCLP35914 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGCLP35914 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HMGCLP35914 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMGCLP35914 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.37■□□□□ 0.21
HMGCLP35914 FOXO1B-201ENST00000504678 1527 ntBASIC16.37■□□□□ 0.21
HMGCLP35914 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms