Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SLC6A4P31645 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A4P31645 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 AC003101.2-201ENST00000612557 442 ntBASIC16.87■□□□□ 0.29
SLC6A4P31645 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SLC6A4P31645 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A4P31645 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A4P31645 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A4P31645 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 AC009053.2-201ENST00000563701 2365 ntBASIC16.86■□□□□ 0.29
SLC6A4P31645 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.86■□□□□ 0.29
SLC6A4P31645 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC6A4P31645 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.86■□□□□ 0.29
SLC6A4P31645 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLC6A4P31645 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC6A4P31645 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC6A4P31645 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC6A4P31645 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC6A4P31645 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A4P31645 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A4P31645 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SLC6A4P31645 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A4P31645 MIR770-201ENST00000390219 98 ntBASIC16.85■□□□□ 0.29
SLC6A4P31645 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 AC107890.1-201ENST00000422478 521 ntBASIC16.85■□□□□ 0.29
SLC6A4P31645 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC6A4P31645 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A4P31645 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A4P31645 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A4P31645 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A4P31645 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A4P31645 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A4P31645 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A4P31645 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms