Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P31025 AL031731.1-201ENST00000642131 2094 ntBASIC15.32■□□□□ 0.04
LCN1P31025 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P31025 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P31025 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P31025 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P31025 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCN1P31025 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P31025 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 POU5F1P6-201ENST00000466990 990 ntBASIC15.31■□□□□ 0.04
LCN1P31025 SLC25A1P1-201ENST00000528351 927 ntBASIC15.31■□□□□ 0.04
LCN1P31025 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LCN1P31025 PDPK2P-202ENST00000562415 1191 ntBASIC15.31■□□□□ 0.04
LCN1P31025 AC140113.2-201ENST00000604370 208 ntBASIC15.31■□□□□ 0.04
LCN1P31025 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.31■□□□□ 0.04
LCN1P31025 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 AC025580.3-201ENST00000617932 1424 ntBASIC15.31■□□□□ 0.04
LCN1P31025 LINC00554-201ENST00000564841 3011 ntBASIC15.31■□□□□ 0.04
LCN1P31025 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
LCN1P31025 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P31025 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 AL671710.1-201ENST00000610245 2349 ntBASIC15.31■□□□□ 0.04
LCN1P31025 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P31025 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P31025 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 HYMAI-201ENST00000635591 3347 ntBASIC15.3■□□□□ 0.04
LCN1P31025 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.3■□□□□ 0.04
LCN1P31025 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LCN1P31025 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 KRT18P58-201ENST00000527480 1120 ntBASIC15.3■□□□□ 0.04
LCN1P31025 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.3■□□□□ 0.04
LCN1P31025 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P31025 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.3■□□□□ 0.04
LCN1P31025 AL009183.1-201ENST00000603760 355 ntBASIC15.3■□□□□ 0.04
LCN1P31025 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCN1P31025 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P31025 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LCN1P31025 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.29■□□□□ 0.04
LCN1P31025 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P31025 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.29■□□□□ 0.04
LCN1P31025 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms