Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 AC005622.1-201ENST00000636801 1703 ntBASIC20.19■□□□□ 0.82
TM4SF1P30408 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TM4SF1P30408 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 TDH-203ENST00000531764 1110 ntBASIC20.19■□□□□ 0.82
TM4SF1P30408 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.19■□□□□ 0.82
TM4SF1P30408 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
TM4SF1P30408 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TM4SF1P30408 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TM4SF1P30408 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF1P30408 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.18■□□□□ 0.82
TM4SF1P30408 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TM4SF1P30408 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TM4SF1P30408 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.18■□□□□ 0.82
TM4SF1P30408 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 AC005229.1-201ENST00000392885 409 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 BCRP2-202ENST00000447763 634 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 BCRP6-201ENST00000510112 632 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.18■□□□□ 0.82
TM4SF1P30408 BCRP7-201ENST00000511549 544 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 AP000812.2-201ENST00000538934 718 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.18■□□□□ 0.82
TM4SF1P30408 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 AC036164.1-201ENST00000570544 333 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 AL365330.1-201ENST00000607459 531 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 AC244093.1-201ENST00000610837 814 ntBASIC20.18■□□□□ 0.82
TM4SF1P30408 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF1P30408 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF1P30408 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TM4SF1P30408 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TM4SF1P30408 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TM4SF1P30408 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF1P30408 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF1P30408 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF1P30408 AC074338.1-201ENST00000416825 156 ntBASIC20.17■□□□□ 0.82
TM4SF1P30408 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.17■□□□□ 0.82
TM4SF1P30408 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 AP001889.1-201ENST00000525414 633 ntBASIC20.17■□□□□ 0.82
TM4SF1P30408 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TM4SF1P30408 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 AC060834.1-201ENST00000443027 2032 ntBASIC20.17■□□□□ 0.82
TM4SF1P30408 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF1P30408 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TM4SF1P30408 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF1P30408 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.16■□□□□ 0.82
TM4SF1P30408 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF1P30408 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF1P30408 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TM4SF1P30408 BRWD1P1-201ENST00000401091 371 ntBASIC20.16■□□□□ 0.82
TM4SF1P30408 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF1P30408 EEF1DP4-201ENST00000446006 880 ntBASIC20.16■□□□□ 0.82
TM4SF1P30408 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.16■□□□□ 0.82
TM4SF1P30408 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.16■□□□□ 0.82
TM4SF1P30408 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.16■□□□□ 0.82
TM4SF1P30408 AC103810.3-201ENST00000583567 96 ntBASIC20.16■□□□□ 0.82
TM4SF1P30408 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.16■□□□□ 0.82
TM4SF1P30408 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.16■□□□□ 0.82
TM4SF1P30408 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms