Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.68□□□□□ -0.06
CD40LGP29965 AC015656.1-201ENST00000624209 3578 ntBASIC14.68□□□□□ -0.06
CD40LGP29965 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD40LGP29965 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 IGHV3-52-201ENST00000519770 353 ntBASIC14.68□□□□□ -0.06
CD40LGP29965 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
CD40LGP29965 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CD40LGP29965 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 CYP2D8P-201ENST00000433633 1490 ntBASIC14.68□□□□□ -0.06
CD40LGP29965 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40LGP29965 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40LGP29965 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40LGP29965 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CD40LGP29965 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40LGP29965 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CD40LGP29965 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CD40LGP29965 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.67□□□□□ -0.06
CD40LGP29965 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.67□□□□□ -0.06
CD40LGP29965 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 AC041040.2-201ENST00000622926 2899 ntBASIC14.67□□□□□ -0.06
CD40LGP29965 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.67□□□□□ -0.06
CD40LGP29965 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.67□□□□□ -0.06
CD40LGP29965 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CD40LGP29965 AC096633.1-201ENST00000422446 749 ntBASIC14.67□□□□□ -0.06
CD40LGP29965 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.67□□□□□ -0.06
CD40LGP29965 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.67□□□□□ -0.06
CD40LGP29965 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 AC004817.3-201ENST00000602957 2129 ntBASIC14.67□□□□□ -0.06
CD40LGP29965 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CD40LGP29965 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 AC079781.5-202ENST00000641784 3743 ntBASIC14.67□□□□□ -0.06
CD40LGP29965 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40LGP29965 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
CD40LGP29965 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CD40LGP29965 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40LGP29965 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40LGP29965 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CD40LGP29965 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40LGP29965 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40LGP29965 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40LGP29965 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms