Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
ERCC3P19447 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.07■□□□□ 0.64
ERCC3P19447 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.07■□□□□ 0.64
ERCC3P19447 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.07■□□□□ 0.64
ERCC3P19447 AC007967.4-201ENST00000614700 386 ntBASIC19.07■□□□□ 0.64
ERCC3P19447 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC3P19447 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ERCC3P19447 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ERCC3P19447 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC3P19447 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
ERCC3P19447 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC3P19447 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 CRB3P1-201ENST00000449338 276 ntBASIC19.06■□□□□ 0.64
ERCC3P19447 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.06■□□□□ 0.64
ERCC3P19447 AP005018.1-201ENST00000525475 301 ntBASIC19.06■□□□□ 0.64
ERCC3P19447 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
ERCC3P19447 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC3P19447 AL138828.2-201ENST00000615812 383 ntBASIC19.06■□□□□ 0.64
ERCC3P19447 UBALD1-205ENST00000590891 2641 ntBASIC19.06■□□□□ 0.64
ERCC3P19447 AL391005.1-201ENST00000623953 2435 ntBASIC19.06■□□□□ 0.64
ERCC3P19447 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ERCC3P19447 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ERCC3P19447 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC3P19447 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC3P19447 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.06■□□□□ 0.64
ERCC3P19447 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC3P19447 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
ERCC3P19447 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC3P19447 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ERCC3P19447 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC3P19447 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 AC106886.4-201ENST00000623557 2502 ntBASIC19.05■□□□□ 0.64
ERCC3P19447 MST1L-201ENST00000442552 2185 ntBASIC19.05■□□□□ 0.64
ERCC3P19447 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.05■□□□□ 0.64
ERCC3P19447 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 PRYP6-201ENST00000514804 343 ntBASIC19.05■□□□□ 0.64
ERCC3P19447 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.05■□□□□ 0.64
ERCC3P19447 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC3P19447 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC3P19447 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC3P19447 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms