Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ERCC2P18074 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ERCC2P18074 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.95■□□□□ 0.3
ERCC2P18074 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ERCC2P18074 DOC2GP-204ENST00000639052 2548 ntBASIC16.95■□□□□ 0.3
ERCC2P18074 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ERCC2P18074 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.95■□□□□ 0.3
ERCC2P18074 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
ERCC2P18074 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ERCC2P18074 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
ERCC2P18074 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.95■□□□□ 0.3
ERCC2P18074 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ERCC2P18074 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ERCC2P18074 AC073439.1-201ENST00000624121 1774 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 MTHFR-217ENST00000641820 1569 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 TFAMP1-201ENST00000412727 736 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 HTR5BP-201ENST00000430851 1154 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 ADH5P3-201ENST00000433842 1137 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 MKNK2P1-201ENST00000437526 628 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 AC093724.1-201ENST00000448659 1027 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.94■□□□□ 0.3
ERCC2P18074 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 AL135744.1-201ENST00000565098 629 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
ERCC2P18074 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
ERCC2P18074 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ERCC2P18074 AC006449.6-201ENST00000612330 2296 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.94■□□□□ 0.3
ERCC2P18074 AKAP8P1-201ENST00000434743 1349 ntBASIC16.94■□□□□ 0.3
ERCC2P18074 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.94■□□□□ 0.3
ERCC2P18074 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ERCC2P18074 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
ERCC2P18074 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ERCC2P18074 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.93■□□□□ 0.3
ERCC2P18074 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ERCC2P18074 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms