Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 AC140878.1-201ENST00000565277 250 ntBASIC18.1■□□□□ 0.49
ATF7P17544 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.1■□□□□ 0.49
ATF7P17544 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.1■□□□□ 0.49
ATF7P17544 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.1■□□□□ 0.49
ATF7P17544 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATF7P17544 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATF7P17544 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ATF7P17544 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF7P17544 TREML5P-201ENST00000421694 576 ntBASIC18.09■□□□□ 0.49
ATF7P17544 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.09■□□□□ 0.49
ATF7P17544 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATF7P17544 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF7P17544 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF7P17544 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.09■□□□□ 0.49
ATF7P17544 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF7P17544 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.09■□□□□ 0.49
ATF7P17544 MIR6080-201ENST00000617359 66 ntBASIC18.09■□□□□ 0.49
ATF7P17544 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATF7P17544 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATF7P17544 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATF7P17544 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.09■□□□□ 0.49
ATF7P17544 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.09■□□□□ 0.49
ATF7P17544 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATF7P17544 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ATF7P17544 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATF7P17544 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ATF7P17544 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
ATF7P17544 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 GK-202ENST00000378941 458 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 MIR661-201ENST00000384842 89 ntBASIC18.08■□□□□ 0.48
ATF7P17544 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 SPDYE7P-202ENST00000420373 878 ntBASIC18.08■□□□□ 0.48
ATF7P17544 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.08■□□□□ 0.48
ATF7P17544 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.08■□□□□ 0.48
ATF7P17544 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF7P17544 AC021097.1-201ENST00000607902 574 ntBASIC18.08■□□□□ 0.48
ATF7P17544 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF7P17544 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF7P17544 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.07■□□□□ 0.48
ATF7P17544 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.07■□□□□ 0.48
ATF7P17544 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF7P17544 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF7P17544 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATF7P17544 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.07■□□□□ 0.48
ATF7P17544 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.07■□□□□ 0.48
ATF7P17544 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms