Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PEPDP12955 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 KRT18P2-201ENST00000447938 1258 ntBASIC15.33■□□□□ 0.04
PEPDP12955 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.33■□□□□ 0.04
PEPDP12955 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.33■□□□□ 0.04
PEPDP12955 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 AC002347.1-201ENST00000569543 541 ntBASIC15.33■□□□□ 0.04
PEPDP12955 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PEPDP12955 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.33■□□□□ 0.04
PEPDP12955 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.33■□□□□ 0.04
PEPDP12955 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.33■□□□□ 0.04
PEPDP12955 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 AL021920.2-201ENST00000624828 1351 ntBASIC15.33■□□□□ 0.04
PEPDP12955 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PEPDP12955 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.33■□□□□ 0.04
PEPDP12955 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
PEPDP12955 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PEPDP12955 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.32■□□□□ 0.04
PEPDP12955 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 IGLL3P-201ENST00000412472 434 ntBASIC15.32■□□□□ 0.04
PEPDP12955 BX842568.4-201ENST00000421222 227 ntBASIC15.32■□□□□ 0.04
PEPDP12955 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.32■□□□□ 0.04
PEPDP12955 RHOQP3-201ENST00000437982 621 ntBASIC15.32■□□□□ 0.04
PEPDP12955 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.32■□□□□ 0.04
PEPDP12955 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PEPDP12955 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PEPDP12955 AC023511.2-201ENST00000618803 211 ntBASIC15.32■□□□□ 0.04
PEPDP12955 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.32■□□□□ 0.04
PEPDP12955 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PEPDP12955 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PEPDP12955 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PEPDP12955 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.31■□□□□ 0.04
PEPDP12955 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PEPDP12955 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PEPDP12955 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.31■□□□□ 0.04
PEPDP12955 AC004832.2-201ENST00000426397 482 ntBASIC15.31■□□□□ 0.04
PEPDP12955 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.31■□□□□ 0.04
PEPDP12955 FAM185BP-201ENST00000443595 716 ntBASIC15.31■□□□□ 0.04
PEPDP12955 DNAJB3-201ENST00000446806 729 ntBASIC15.31■□□□□ 0.04
PEPDP12955 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.31■□□□□ 0.04
PEPDP12955 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.31■□□□□ 0.04
PEPDP12955 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 AC092865.5-201ENST00000545435 363 ntBASIC15.31■□□□□ 0.04
PEPDP12955 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
PEPDP12955 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
PEPDP12955 DUX4L17-201ENST00000557360 1267 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms