Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHRNB1P11230 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNB1P11230 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNB1P11230 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNB1P11230 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.65■□□□□ 0.26
CHRNB1P11230 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CHRNB1P11230 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.65■□□□□ 0.26
CHRNB1P11230 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHRNB1P11230 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 TUBB8P12-201ENST00000308911 1335 ntBASIC16.65■□□□□ 0.26
CHRNB1P11230 TUBB7P-202ENST00000428444 1305 ntBASIC16.65■□□□□ 0.26
CHRNB1P11230 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 TUBB8P7-204ENST00000567960 1332 ntBASIC16.65■□□□□ 0.26
CHRNB1P11230 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNB1P11230 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNB1P11230 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNB1P11230 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNB1P11230 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNB1P11230 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNB1P11230 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNB1P11230 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 AC068418.2-201ENST00000577309 3703 ntBASIC16.64■□□□□ 0.25
CHRNB1P11230 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.64■□□□□ 0.25
CHRNB1P11230 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHRNB1P11230 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNB1P11230 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNB1P11230 AC124947.2-201ENST00000547118 1133 ntBASIC16.64■□□□□ 0.25
CHRNB1P11230 RAB43P1-201ENST00000561790 589 ntBASIC16.64■□□□□ 0.25
CHRNB1P11230 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNB1P11230 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CHRNB1P11230 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.64■□□□□ 0.25
CHRNB1P11230 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNB1P11230 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CHRNB1P11230 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNB1P11230 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CHRNB1P11230 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms