Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 PMS2P1-201ENST00000431037 1228 ntBASIC14.19□□□□□ -0.14
VSIG8P0DPA2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 CYP2A7P1-201ENST00000595391 815 ntBASIC14.19□□□□□ -0.14
VSIG8P0DPA2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AC010654.1-201ENST00000615722 808 ntBASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AC112504.1-201ENST00000623415 1841 ntBASIC14.19□□□□□ -0.14
VSIG8P0DPA2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 AL356309.3-201ENST00000624132 1934 ntBASIC14.19□□□□□ -0.14
VSIG8P0DPA2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VSIG8P0DPA2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC144831.1-201ENST00000573312 2656 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 DBET-201ENST00000630918 3363 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 MIR3908-201ENST00000579798 126 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC138894.3-201ENST00000603787 634 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC010326.4-201ENST00000604665 891 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC092119.3-201ENST00000612618 583 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 PI4KAP1-204ENST00000612579 1703 ntBASIC14.18□□□□□ -0.14
VSIG8P0DPA2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VSIG8P0DPA2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VSIG8P0DPA2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms