Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CD48P09326 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 AC092474.2-201ENST00000424288 719 ntBASIC17.09■□□□□ 0.33
CD48P09326 AC140658.5-201ENST00000438532 169 ntBASIC17.09■□□□□ 0.33
CD48P09326 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 AC109635.5-201ENST00000533593 962 ntBASIC17.09■□□□□ 0.33
CD48P09326 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 ZNF259P1-201ENST00000407656 1365 ntBASIC17.09■□□□□ 0.33
CD48P09326 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CD48P09326 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 AL365203.3-201ENST00000609742 2057 ntBASIC17.09■□□□□ 0.33
CD48P09326 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 AL603832.2-201ENST00000566195 2125 ntBASIC17.09■□□□□ 0.33
CD48P09326 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD48P09326 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD48P09326 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD48P09326 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.08■□□□□ 0.33
CD48P09326 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD48P09326 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD48P09326 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CD48P09326 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.08■□□□□ 0.32
CD48P09326 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.08■□□□□ 0.32
CD48P09326 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.08■□□□□ 0.32
CD48P09326 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CD48P09326 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.08■□□□□ 0.32
CD48P09326 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CD48P09326 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD48P09326 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 AC016027.1-202ENST00000607927 1699 ntBASIC17.07■□□□□ 0.32
CD48P09326 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.07■□□□□ 0.32
CD48P09326 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.07■□□□□ 0.32
CD48P09326 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.07■□□□□ 0.32
CD48P09326 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.07■□□□□ 0.32
CD48P09326 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.07■□□□□ 0.32
CD48P09326 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.07■□□□□ 0.32
CD48P09326 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CD48P09326 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.07■□□□□ 0.32
CD48P09326 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.07■□□□□ 0.32
CD48P09326 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CD48P09326 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD48P09326 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms