Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBC1P01850 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRBC1P01850 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TRBC1P01850 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBC1P01850 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 AL627223.1-201ENST00000416693 442 ntBASIC16.5■□□□□ 0.23
TRBC1P01850 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 AC093520.2-201ENST00000561830 333 ntBASIC16.5■□□□□ 0.23
TRBC1P01850 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
TRBC1P01850 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBC1P01850 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRBC1P01850 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRBC1P01850 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBC1P01850 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 AC142381.1-201ENST00000426099 345 ntBASIC16.49■□□□□ 0.23
TRBC1P01850 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 AC005237.2-201ENST00000434368 219 ntBASIC16.49■□□□□ 0.23
TRBC1P01850 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.49■□□□□ 0.23
TRBC1P01850 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 AC005622.1-201ENST00000636801 1703 ntBASIC16.49■□□□□ 0.23
TRBC1P01850 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 UXT-AS1-201ENST00000590504 1525 ntBASIC16.49■□□□□ 0.23
TRBC1P01850 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRBC1P01850 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBC1P01850 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBC1P01850 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBC1P01850 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRBC1P01850 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRBC1P01850 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBC1P01850 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBC1P01850 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBC1P01850 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBC1P01850 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
TRBC1P01850 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms