Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 AC087289.5-201ENST00000586076 3175 ntBASIC17.59■□□□□ 0.41
TIMP1P01033 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TIMP1P01033 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.58■□□□□ 0.41
TIMP1P01033 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TIMP1P01033 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TIMP1P01033 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TIMP1P01033 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.58■□□□□ 0.41
TIMP1P01033 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.58■□□□□ 0.41
TIMP1P01033 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TIMP1P01033 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TIMP1P01033 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.58■□□□□ 0.41
TIMP1P01033 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TIMP1P01033 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.58■□□□□ 0.4
TIMP1P01033 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.58■□□□□ 0.4
TIMP1P01033 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 AC092506.1-202ENST00000401022 528 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 FAM86LP-201ENST00000478302 853 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.58■□□□□ 0.4
TIMP1P01033 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.58■□□□□ 0.4
TIMP1P01033 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.58■□□□□ 0.4
TIMP1P01033 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.58■□□□□ 0.4
TIMP1P01033 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.58■□□□□ 0.4
TIMP1P01033 MIR4321-201ENST00000592276 80 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 AC010328.2-201ENST00000597698 1111 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 AC243960.2-201ENST00000600996 747 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 AL365330.1-201ENST00000607459 531 ntBASIC17.58■□□□□ 0.4
TIMP1P01033 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.58■□□□□ 0.4
TIMP1P01033 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TIMP1P01033 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.58■□□□□ 0.4
TIMP1P01033 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TIMP1P01033 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMP1P01033 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.58■□□□□ 0.4
TIMP1P01033 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TIMP1P01033 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TIMP1P01033 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.57■□□□□ 0.4
TIMP1P01033 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.57■□□□□ 0.4
TIMP1P01033 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.57■□□□□ 0.4
TIMP1P01033 RPL13P2-201ENST00000440687 659 ntBASIC17.57■□□□□ 0.4
TIMP1P01033 YBX1P6-201ENST00000442962 1002 ntBASIC17.57■□□□□ 0.4
TIMP1P01033 AL355864.2-201ENST00000447420 863 ntBASIC17.57■□□□□ 0.4
TIMP1P01033 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.57■□□□□ 0.4
TIMP1P01033 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.57■□□□□ 0.4
TIMP1P01033 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.57■□□□□ 0.4
TIMP1P01033 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.57■□□□□ 0.4
TIMP1P01033 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TIMP1P01033 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
TIMP1P01033 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.57■□□□□ 0.4
TIMP1P01033 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMP1P01033 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMP1P01033 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMP1P01033 CROCCP2-202ENST00000412962 2773 ntBASIC17.56■□□□□ 0.4
TIMP1P01033 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TIMP1P01033 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.56■□□□□ 0.4
TIMP1P01033 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMP1P01033 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.56■□□□□ 0.4
TIMP1P01033 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMP1P01033 AC079316.1-201ENST00000548397 411 ntBASIC17.56■□□□□ 0.4
TIMP1P01033 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.56■□□□□ 0.4
TIMP1P01033 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMP1P01033 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms