Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.27■□□□□ 0.04
LGI1O95970 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LGI1O95970 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.27■□□□□ 0.04
LGI1O95970 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 MRPL3P1-201ENST00000400109 1033 ntBASIC15.27■□□□□ 0.04
LGI1O95970 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
LGI1O95970 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LGI1O95970 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LGI1O95970 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.27■□□□□ 0.04
LGI1O95970 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LGI1O95970 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LGI1O95970 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.27■□□□□ 0.04
LGI1O95970 PAUPAR-201ENST00000630360 2965 ntBASIC15.27■□□□□ 0.04
LGI1O95970 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LGI1O95970 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
LGI1O95970 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 AC012569.1-201ENST00000591191 1524 ntBASIC15.27■□□□□ 0.03
LGI1O95970 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.27■□□□□ 0.03
LGI1O95970 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LGI1O95970 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 AC026396.1-201ENST00000419388 421 ntBASIC15.26■□□□□ 0.03
LGI1O95970 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.26■□□□□ 0.03
LGI1O95970 HNRNPDP1-201ENST00000439535 754 ntBASIC15.26■□□□□ 0.03
LGI1O95970 AC018712.1-201ENST00000455767 687 ntBASIC15.26■□□□□ 0.03
LGI1O95970 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 OR7E47P-204ENST00000575924 449 ntBASIC15.26■□□□□ 0.03
LGI1O95970 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.26■□□□□ 0.03
LGI1O95970 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.26■□□□□ 0.03
LGI1O95970 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.26■□□□□ 0.03
LGI1O95970 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 AC010491.1-201ENST00000563101 2797 ntBASIC15.26■□□□□ 0.03
LGI1O95970 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.26■□□□□ 0.03
LGI1O95970 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
LGI1O95970 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
LGI1O95970 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LGI1O95970 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LGI1O95970 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LGI1O95970 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LGI1O95970 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LGI1O95970 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms