Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 PGAM5P1-201ENST00000518923 814 ntBASIC13.2□□□□□ -0.3
NDUFA3O95167 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 AC112191.1-201ENST00000523689 701 ntBASIC13.2□□□□□ -0.3
NDUFA3O95167 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 AP002472.1-201ENST00000577490 586 ntBASIC13.2□□□□□ -0.3
NDUFA3O95167 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 AC092919.2-201ENST00000623631 1645 ntBASIC13.2□□□□□ -0.3
NDUFA3O95167 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 KRT18P34-201ENST00000488218 1270 ntBASIC13.19□□□□□ -0.3
NDUFA3O95167 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFA3O95167 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 AC002347.1-201ENST00000569543 541 ntBASIC13.19□□□□□ -0.3
NDUFA3O95167 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 AL671883.3-201ENST00000603274 991 ntBASIC13.19□□□□□ -0.3
NDUFA3O95167 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 AL078644.1-201ENST00000609881 752 ntBASIC13.19□□□□□ -0.3
NDUFA3O95167 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFA3O95167 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA3O95167 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 AC126755.1-201ENST00000525846 6405 ntBASIC13.19□□□□□ -0.3
NDUFA3O95167 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA3O95167 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA3O95167 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NDUFA3O95167 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
NDUFA3O95167 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFA3O95167 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFA3O95167 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.18□□□□□ -0.3
NDUFA3O95167 AC018695.7-201ENST00000624587 2492 ntBASIC13.18□□□□□ -0.3
NDUFA3O95167 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.18□□□□□ -0.3
NDUFA3O95167 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NDUFA3O95167 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms