Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFS3O75489 AC018845.2-201ENST00000568326 409 ntBASIC16.47■□□□□ 0.23
NDUFS3O75489 MIR3909-201ENST00000579518 119 ntBASIC16.47■□□□□ 0.23
NDUFS3O75489 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 AC004877.2-201ENST00000623941 599 ntBASIC16.47■□□□□ 0.23
NDUFS3O75489 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.47■□□□□ 0.23
NDUFS3O75489 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 AC025580.3-201ENST00000617932 1424 ntBASIC16.46■□□□□ 0.23
NDUFS3O75489 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFS3O75489 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NDUFS3O75489 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFS3O75489 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.46■□□□□ 0.23
NDUFS3O75489 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.46■□□□□ 0.23
NDUFS3O75489 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.46■□□□□ 0.23
NDUFS3O75489 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.46■□□□□ 0.23
NDUFS3O75489 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.46■□□□□ 0.23
NDUFS3O75489 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NDUFS3O75489 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.46■□□□□ 0.23
NDUFS3O75489 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.46■□□□□ 0.23
NDUFS3O75489 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NDUFS3O75489 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.46■□□□□ 0.23
NDUFS3O75489 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS3O75489 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDUFS3O75489 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
NDUFS3O75489 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS3O75489 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDUFS3O75489 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDUFS3O75489 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS3O75489 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS3O75489 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFS3O75489 KRT18P2-201ENST00000447938 1258 ntBASIC16.45■□□□□ 0.22
NDUFS3O75489 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFS3O75489 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFS3O75489 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS3O75489 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFS3O75489 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
NDUFS3O75489 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS3O75489 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms