Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZIC3O60481 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZIC3O60481 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.79□□□□□ -0.04
ZIC3O60481 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.79□□□□□ -0.04
ZIC3O60481 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.79□□□□□ -0.04
ZIC3O60481 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC3O60481 AC018529.1-201ENST00000613063 361 ntBASIC14.79□□□□□ -0.04
ZIC3O60481 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC3O60481 U82695.1-201ENST00000635752 1889 ntBASIC14.79□□□□□ -0.04
ZIC3O60481 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC3O60481 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 SPDYE7P-202ENST00000420373 878 ntBASIC14.78□□□□□ -0.04
ZIC3O60481 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.78□□□□□ -0.04
ZIC3O60481 RFPL4AP1-201ENST00000530883 850 ntBASIC14.78□□□□□ -0.04
ZIC3O60481 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.78□□□□□ -0.04
ZIC3O60481 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 MIR4453-201ENST00000584019 89 ntBASIC14.78□□□□□ -0.04
ZIC3O60481 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.78□□□□□ -0.04
ZIC3O60481 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC3O60481 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms