Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 AC073439.1-201ENST00000624121 1774 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
LCMT2O60294 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 SPDYE11-202ENST00000450699 704 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.77■□□□□ 0.12
LCMT2O60294 SPDYE9P-201ENST00000570642 692 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.77■□□□□ 0.12
LCMT2O60294 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 SPDYE10P-202ENST00000612005 668 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 SPDYE8P-202ENST00000612377 668 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 AC105339.1-204ENST00000636249 355 ntBASIC15.77■□□□□ 0.12
LCMT2O60294 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.77■□□□□ 0.11
LCMT2O60294 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.77■□□□□ 0.11
LCMT2O60294 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.77■□□□□ 0.11
LCMT2O60294 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.77■□□□□ 0.11
LCMT2O60294 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.77■□□□□ 0.11
LCMT2O60294 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LCMT2O60294 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LCMT2O60294 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.77■□□□□ 0.11
LCMT2O60294 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LCMT2O60294 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LCMT2O60294 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.76■□□□□ 0.11
LCMT2O60294 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.76■□□□□ 0.11
LCMT2O60294 TIMM8BP1-201ENST00000452384 211 ntBASIC15.76■□□□□ 0.11
LCMT2O60294 AC079140.1-201ENST00000508039 487 ntBASIC15.76■□□□□ 0.11
LCMT2O60294 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 LINC01225-203ENST00000563550 1244 ntBASIC15.76■□□□□ 0.11
LCMT2O60294 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.76■□□□□ 0.11
LCMT2O60294 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.76■□□□□ 0.11
LCMT2O60294 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.76■□□□□ 0.11
LCMT2O60294 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.76■□□□□ 0.11
LCMT2O60294 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LCMT2O60294 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LCMT2O60294 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LCMT2O60294 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms