Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH17O14917 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
PCDH17O14917 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH17O14917 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH17O14917 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH17O14917 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.79■□□□□ 0.12
PCDH17O14917 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH17O14917 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH17O14917 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDH17O14917 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDH17O14917 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH17O14917 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH17O14917 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDH17O14917 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
PCDH17O14917 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH17O14917 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH17O14917 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 AKAP8P1-201ENST00000434743 1349 ntBASIC15.78■□□□□ 0.12
PCDH17O14917 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH17O14917 PMS2P4-201ENST00000412466 1052 ntBASIC15.78■□□□□ 0.12
PCDH17O14917 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
PCDH17O14917 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH17O14917 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.78■□□□□ 0.12
PCDH17O14917 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH17O14917 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCDH17O14917 AC092902.6-201ENST00000641783 218 ntBASIC15.78■□□□□ 0.12
PCDH17O14917 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDH17O14917 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH17O14917 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDH17O14917 HLA-A-202ENST00000376806 1854 ntBASIC15.78■□□□□ 0.12
PCDH17O14917 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 AL645728.1-201ENST00000366221 2101 ntBASIC15.77■□□□□ 0.12
PCDH17O14917 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH17O14917 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH17O14917 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH17O14917 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 CNN2P11-201ENST00000429351 262 ntBASIC15.77■□□□□ 0.12
PCDH17O14917 METTL21AP1-201ENST00000438852 635 ntBASIC15.77■□□□□ 0.12
PCDH17O14917 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDH17O14917 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDH17O14917 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH17O14917 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
PCDH17O14917 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH17O14917 LINC02084-201ENST00000606069 1096 ntBASIC15.77■□□□□ 0.12
PCDH17O14917 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH17O14917 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
PCDH17O14917 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDH17O14917 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PCDH17O14917 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDH17O14917 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH17O14917 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCDH17O14917 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms