Protein–RNA interactions for Protein: O14813

PHOX2A, Paired mesoderm homeobox protein 2A, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2AO14813 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHOX2AO14813 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.78□□□□□ -0.36
PHOX2AO14813 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PHOX2AO14813 AL390755.1-201ENST00000623716 2027 ntBASIC12.78□□□□□ -0.36
PHOX2AO14813 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PHOX2AO14813 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHOX2AO14813 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PHOX2AO14813 COL6A4P2-202ENST00000504443 2753 ntBASIC12.77□□□□□ -0.36
PHOX2AO14813 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PHOX2AO14813 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHOX2AO14813 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.77□□□□□ -0.36
PHOX2AO14813 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PHOX2AO14813 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHOX2AO14813 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
PHOX2AO14813 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PHOX2AO14813 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PHOX2AO14813 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
PHOX2AO14813 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.77□□□□□ -0.37
PHOX2AO14813 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PHOX2AO14813 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PHOX2AO14813 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 AL353807.1-201ENST00000427475 662 ntBASIC12.77□□□□□ -0.37
PHOX2AO14813 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.77□□□□□ -0.37
PHOX2AO14813 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.77□□□□□ -0.37
PHOX2AO14813 FAM201B-201ENST00000458407 597 ntBASIC12.77□□□□□ -0.37
PHOX2AO14813 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
PHOX2AO14813 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.77□□□□□ -0.37
PHOX2AO14813 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.77□□□□□ -0.37
PHOX2AO14813 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.77□□□□□ -0.37
PHOX2AO14813 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PHOX2AO14813 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.77□□□□□ -0.37
PHOX2AO14813 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PHOX2AO14813 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PHOX2AO14813 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.76□□□□□ -0.37
PHOX2AO14813 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.76□□□□□ -0.37
PHOX2AO14813 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.76□□□□□ -0.37
PHOX2AO14813 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 KRASP1-201ENST00000407852 552 ntBASIC12.76□□□□□ -0.37
PHOX2AO14813 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 AC008040.2-201ENST00000461049 708 ntBASIC12.76□□□□□ -0.37
PHOX2AO14813 UNC93B5-201ENST00000530315 699 ntBASIC12.76□□□□□ -0.37
PHOX2AO14813 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.76□□□□□ -0.37
PHOX2AO14813 AC069544.1-201ENST00000609399 999 ntBASIC12.76□□□□□ -0.37
PHOX2AO14813 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 KRT8P47-201ENST00000604727 1398 ntBASIC12.76□□□□□ -0.37
PHOX2AO14813 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
PHOX2AO14813 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PHOX2AO14813 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.76□□□□□ -0.37
PHOX2AO14813 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
PHOX2AO14813 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms