Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL512356.2-201ENST00000546955 174 ntBASIC17.36■□□□□ 0.37
CLDN5O00501 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN5O00501 MIR6080-201ENST00000617359 66 ntBASIC17.36■□□□□ 0.37
CLDN5O00501 AC093512.1-201ENST00000617969 520 ntBASIC17.36■□□□□ 0.37
CLDN5O00501 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN5O00501 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN5O00501 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN5O00501 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN5O00501 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN5O00501 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN5O00501 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.36■□□□□ 0.37
CLDN5O00501 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN5O00501 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN5O00501 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN5O00501 CYMP-203ENST00000474680 1263 ntBASIC17.35■□□□□ 0.37
CLDN5O00501 AC098859.1-201ENST00000502915 1238 ntBASIC17.35■□□□□ 0.37
CLDN5O00501 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN5O00501 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN5O00501 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN5O00501 MIR4453-201ENST00000584019 89 ntBASIC17.35■□□□□ 0.37
CLDN5O00501 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN5O00501 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 AL589702.1-201ENST00000641229 1509 ntBASIC17.35■□□□□ 0.37
CLDN5O00501 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN5O00501 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN5O00501 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN5O00501 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
CLDN5O00501 AL662844.4-201ENST00000606367 2838 ntBASIC17.34■□□□□ 0.37
CLDN5O00501 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN5O00501 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 AL355385.1-201ENST00000606123 409 ntBASIC17.34■□□□□ 0.37
CLDN5O00501 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN5O00501 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN5O00501 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN5O00501 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms