Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.04■□□□□ -0
NPIPA2E9PIF3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.04■□□□□ -0
NPIPA2E9PIF3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA2E9PIF3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 AC016027.1-202ENST00000607927 1699 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 LINC00895-201ENST00000629028 1637 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 DUX4L27-201ENST00000554796 1261 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 SPCS2P1-201ENST00000561636 679 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 LINC01225-203ENST00000563550 1244 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 AC005498.2-205ENST00000593218 784 ntBASIC15.03■□□□□ -0
NPIPA2E9PIF3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPA2E9PIF3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.03■□□□□ -0
NPIPA2E9PIF3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.02■□□□□ -0
NPIPA2E9PIF3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 TUBB3P1-201ENST00000405796 1332 ntBASIC15.02■□□□□ -0
NPIPA2E9PIF3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 MIR3909-201ENST00000579518 119 ntBASIC15.02■□□□□ -0
NPIPA2E9PIF3 AC027307.2-201ENST00000591252 911 ntBASIC15.02■□□□□ -0
NPIPA2E9PIF3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPA2E9PIF3 AP001059.3-201ENST00000619053 235 ntBASIC15.02■□□□□ -0
NPIPA2E9PIF3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.02■□□□□ -0
NPIPA2E9PIF3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 AC006277.1-201ENST00000624348 1610 ntBASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NPIPA2E9PIF3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms