Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MED15P5-201ENST00000423150 992 ntBASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 KRT19P2-202ENST00000557173 1012 ntBASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRIM6-TRIM34B2RNG4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 RNA5SP416-201ENST00000516838 111 ntBASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC027601.4-201ENST00000611259 610 ntBASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CYP2T1P-202ENST00000641596 2535 ntBASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM6-TRIM34B2RNG4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 MIR940-201ENST00000401276 94 ntBASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 PMS2P4-201ENST00000412466 1052 ntBASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 KRT18P3-201ENST00000451602 1288 ntBASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 AC021097.1-201ENST00000607902 574 ntBASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 AL513190.1-201ENST00000621254 727 ntBASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRIM6-TRIM34B2RNG4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms