Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AL136038.3-201ENST00000561909 1096 ntBASIC14.15□□□□□ -0.14
TMEM235A6NFC5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 Z69720.1-201ENST00000601483 472 ntBASIC14.15□□□□□ -0.14
TMEM235A6NFC5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 KRT8P39-201ENST00000396270 1433 ntBASIC14.15□□□□□ -0.14
TMEM235A6NFC5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM235A6NFC5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.15□□□□□ -0.15
TMEM235A6NFC5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.15□□□□□ -0.15
TMEM235A6NFC5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TMEM235A6NFC5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PCGF3-213ENST00000620529 1899 ntBASIC14.14□□□□□ -0.15
TMEM235A6NFC5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AC112504.1-201ENST00000623415 1841 ntBASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AL121672.3-201ENST00000608644 468 ntBASIC14.14□□□□□ -0.15
TMEM235A6NFC5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AL590326.2-201ENST00000625139 305 ntBASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AC022532.1-201ENST00000624563 1728 ntBASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM235A6NFC5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 POU5F1P6-201ENST00000466990 990 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 LINC01238-205ENST00000567549 1107 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AL353135.1-201ENST00000606729 504 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM235A6NFC5 AC073592.4-201ENST00000623827 446 ntBASIC14.13□□□□□ -0.15
TMEM235A6NFC5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms