Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AL022342.1-201ENST00000400363 863 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AL020989.1-201ENST00000422979 469 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AC093909.1-201ENST00000504731 1122 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AC012640.2-201ENST00000561606 901 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AC139887.3-201ENST00000568585 713 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AC107918.4-202ENST00000641623 219 ntBASIC14.98□□□□□ -0.01
TMEM129A0AVI4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM129A0AVI4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC144831.1-201ENST00000573312 2656 ntBASIC14.97□□□□□ -0.01
TMEM129A0AVI4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC148477.5-201ENST00000625164 1645 ntBASIC14.97□□□□□ -0.01
TMEM129A0AVI4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC120114.3-201ENST00000611923 658 ntBASIC14.97□□□□□ -0.01
TMEM129A0AVI4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.97□□□□□ -0.01
TMEM129A0AVI4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 AC099063.4-201ENST00000641099 1602 ntBASIC14.96□□□□□ -0.01
TMEM129A0AVI4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.96□□□□□ -0.01
TMEM129A0AVI4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms