Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 AC241585.1-201ENST00000433527 519 ntBASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 AC103702.1-201ENST00000548801 2630 ntBASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 AC092850.2-201ENST00000623821 2697 ntBASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 DOC2GP-204ENST00000639052 2548 ntBASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA9Q9Y5G4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 AC092580.3-201ENST00000430932 139 ntBASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 CRB3P1-201ENST00000449338 276 ntBASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA9Q9Y5G4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms