Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC002347.1-201ENST00000569543 541 ntBASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AP002472.1-201ENST00000577490 586 ntBASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC005052.1-201ENST00000625181 2492 ntBASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHB13Q9Y5F0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 AC002056.1-201ENST00000395613 760 ntBASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 AC092364.2-201ENST00000596710 2692 ntBASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHB13Q9Y5F0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AC092919.2-201ENST00000623631 1645 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AC112191.1-201ENST00000523689 701 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AL161645.1-201ENST00000622716 1255 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 GAPDHP74-202ENST00000632456 782 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 LINC01144-201ENST00000626198 1710 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms