Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 AC010336.2-201ENST00000564226 506 ntBASIC17.13■□□□□ 0.33
YIPF1Q9Y548 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 AC078925.2-201ENST00000624013 1973 ntBASIC17.13■□□□□ 0.33
YIPF1Q9Y548 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YIPF1Q9Y548 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 RNF216P1-203ENST00000404404 2427 ntBASIC17.12■□□□□ 0.33
YIPF1Q9Y548 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 ZNF890P-202ENST00000530367 1156 ntBASIC17.12■□□□□ 0.33
YIPF1Q9Y548 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 AC025048.6-201ENST00000634326 1161 ntBASIC17.12■□□□□ 0.33
YIPF1Q9Y548 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 HLA-A-202ENST00000376806 1854 ntBASIC17.12■□□□□ 0.33
YIPF1Q9Y548 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
YIPF1Q9Y548 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 LINC01144-201ENST00000626198 1710 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 SERBP1P3-201ENST00000459980 809 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 AC135586.1-201ENST00000539323 574 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 AC027307.3-201ENST00000594262 1100 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.11■□□□□ 0.33
YIPF1Q9Y548 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.11■□□□□ 0.33
YIPF1Q9Y548 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms