Protein–RNA interactions for Protein: Q9UJT0

TUBE1, Tubulin epsilon chain, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1Q9UJT0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBE1Q9UJT0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TUBE1Q9UJT0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBE1Q9UJT0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBE1Q9UJT0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 AL139400.1-201ENST00000366220 510 ntBASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 AC005412.3-201ENST00000580309 715 ntBASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 AC106028.4-201ENST00000614509 607 ntBASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
TUBE1Q9UJT0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 GGT4P-201ENST00000623672 1708 ntBASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBE1Q9UJT0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 AC008894.3-201ENST00000624324 3103 ntBASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 AC023141.5-201ENST00000458585 616 ntBASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.8■□□□□ 0.6
TUBE1Q9UJT0 MPDU1-223ENST00000582151 728 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms