Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 AC142381.1-201ENST00000426099 345 ntBASIC16.81■□□□□ 0.28
EBF1Q9UH73 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 AC105233.2-201ENST00000523697 349 ntBASIC16.81■□□□□ 0.28
EBF1Q9UH73 AF228730.5-201ENST00000530288 346 ntBASIC16.81■□□□□ 0.28
EBF1Q9UH73 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 AL596325.1-201ENST00000563991 1082 ntBASIC16.81■□□□□ 0.28
EBF1Q9UH73 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EBF1Q9UH73 AC022144.1-201ENST00000602255 1580 ntBASIC16.81■□□□□ 0.28
EBF1Q9UH73 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF1Q9UH73 DOC2GP-204ENST00000639052 2548 ntBASIC16.8■□□□□ 0.28
EBF1Q9UH73 FLJ38576-201ENST00000623820 2459 ntBASIC16.8■□□□□ 0.28
EBF1Q9UH73 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 AC016396.2-201ENST00000562575 1417 ntBASIC16.8■□□□□ 0.28
EBF1Q9UH73 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 RARRES2P9-201ENST00000565168 469 ntBASIC16.8■□□□□ 0.28
EBF1Q9UH73 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 AC007967.4-201ENST00000614700 386 ntBASIC16.8■□□□□ 0.28
EBF1Q9UH73 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF1Q9UH73 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF1Q9UH73 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EBF1Q9UH73 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.79■□□□□ 0.28
EBF1Q9UH73 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF1Q9UH73 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF1Q9UH73 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms